ANGSD: Analysis of next generation Sequencing Data

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  1. Temp‏‎ (21:47, 29 May 2012)
  2. Li2010‏‎ (21:40, 14 June 2012)
  3. Majorminor‏‎ (21:41, 14 June 2012)
  4. Covariance matrix for PCA‏‎ (16:19, 18 June 2012)
  5. Inbreed‏‎ (16:27, 18 June 2012)
  6. SNP Calling‏‎ (12:34, 19 June 2012)
  7. Example of cases control phenotype file‏‎ (10:09, 21 June 2012)
  8. Example of a quantitative phenotype file‏‎ (10:10, 21 June 2012)
  9. Example of a covariance file‏‎ (10:10, 21 June 2012)
  10. Example of a covariate file‏‎ (10:11, 21 June 2012)
  11. Regionfile‏‎ (15:37, 29 June 2012)
  12. Skotte‏‎ (13:28, 24 September 2012)
  13. SoapSNP‏‎ (13:32, 24 September 2012)
  14. Introduction‏‎ (19:13, 23 October 2012)
  15. Glf files‏‎ (13:00, 24 October 2012)
  16. Memory Usage‏‎ (03:32, 18 December 2012)
  17. Error estimation method‏‎ (17:53, 12 February 2013)
  18. Authors‏‎ (13:50, 28 June 2013)
  19. Kim2011‏‎ (14:54, 28 June 2013)
  20. Skotte2012‏‎ (11:27, 29 June 2013)
  21. Nielsen2012‏‎ (11:31, 29 June 2013)
  22. Li2011‏‎ (11:38, 29 June 2013)
  23. Gatk‏‎ (11:43, 29 June 2013)
  24. Base quality‏‎ (09:17, 30 September 2013)
  25. Korneliussen2013‏‎ (15:03, 3 October 2013)
  26. Angsd structure‏‎ (20:03, 4 December 2013)
  27. Changes‏‎ (19:02, 17 December 2013)
  28. Depth‏‎ (13:16, 3 January 2014)
  29. Tutorial‏‎ (01:31, 10 January 2014)
  30. MajorMinor Method‏‎ (15:15, 26 February 2014)
  31. ErrorSykMethod‏‎ (17:12, 26 February 2014)
  32. ErrorPerfect‏‎ (17:15, 26 February 2014)
  33. PostFreq‏‎ (17:44, 26 February 2014)
  34. Orlando2013‏‎ (14:32, 27 June 2014)
  35. Rasmussen2011‏‎ (14:35, 27 June 2014)
  36. RealSFSmethod‏‎ (13:23, 30 June 2014)
  37. Misc example‏‎ (11:55, 31 July 2014)
  38. SYKmaf‏‎ (19:50, 15 December 2014)
  39. Bugs‏‎ (17:05, 26 February 2015)
  40. NgsRelate‏‎ (10:23, 20 June 2015)
  41. Contamination‏‎ (15:51, 11 July 2015)
  42. Fst PCA‏‎ (16:21, 30 July 2015)
  43. Fst correctness‏‎ (16:27, 30 July 2015)
  44. Citing angsd‏‎ (10:08, 31 August 2015)
  45. Pbs‏‎ (18:38, 8 October 2015)
  46. Sites‏‎ (16:00, 16 November 2015)
  47. Major Minor‏‎ (14:56, 4 December 2015)
  48. Quick Start‏‎ (14:58, 4 December 2015)
  49. ANGSD‏‎ (15:07, 4 December 2015)
  50. Supersim‏‎ (16:18, 4 December 2015)

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