Thetas,Tajima,Neutrality tests: Revision history

27 August 2020

• curprev 14:4014:40, 27 August 2020‎ Thorfinn talk contribs‎ 15,776 bytes +80‎ →‎Full command list for below examples

1 April 2020

• curprev 13:0613:06, 1 April 2020‎ Thorfinn talk contribs‎ 15,696 bytes +109‎ →‎Step 1: Finding a 'global estimate' of the SFS
• curprev 13:0513:05, 1 April 2020‎ Thorfinn talk contribs‎ 15,587 bytes +169‎ →‎Full command list for below examples
• curprev 13:0313:03, 1 April 2020‎ Thorfinn talk contribs‎ 15,418 bytes +37‎ →‎Full command list for below examples
• curprev 12:5612:56, 1 April 2020‎ Thorfinn talk contribs‎ 15,381 bytes −493‎ →‎Unknown ancestral state (folded sfs)
• curprev 12:5212:52, 1 April 2020‎ Thorfinn talk contribs‎ 15,874 bytes −38‎ →‎Step 2: Calculate the thetas for each site

29 May 2017

• curprev 21:5321:53, 29 May 2017‎ Thorfinn talk contribs‎ 15,912 bytes 0‎ →‎Example Output

8 February 2017

• curprev 18:5918:59, 8 February 2017‎ Thorfinn talk contribs‎ 15,912 bytes +1‎ →‎.thetas.gz.pestPG
• curprev 18:5818:58, 8 February 2017‎ Thorfinn talk contribs‎ 15,911 bytes +64‎ →‎Example
• curprev 18:5718:57, 8 February 2017‎ Thorfinn talk contribs‎ 15,847 bytes +1‎ →‎./thetaStat print angsdput.thetas.gz
• curprev 18:5618:56, 8 February 2017‎ Thorfinn talk contribs‎ 15,846 bytes +42‎ →‎Example Output
• curprev 18:5518:55, 8 February 2017‎ Thorfinn talk contribs‎ 15,804 bytes +1‎ →‎Step 3b: Sliding Window example
• curprev 18:5418:54, 8 February 2017‎ Thorfinn talk contribs‎ 15,803 bytes +2‎ →‎Step 3a: Estimate Tajimas D and other statistics
• curprev 18:5418:54, 8 February 2017‎ Thorfinn talk contribs‎ 15,801 bytes +1‎ →‎Full command list for below examples
• curprev 18:5018:50, 8 February 2017‎ Thorfinn talk contribs‎ 15,800 bytes −112‎ →‎Unknown ancestral state (folded sfs)
• curprev 18:4918:49, 8 February 2017‎ Thorfinn talk contribs‎ 15,912 bytes −14‎ →‎Step 3b: Sliding Window example
• curprev 18:4818:48, 8 February 2017‎ Thorfinn talk contribs‎ 15,926 bytes −157‎ →‎Step 3a: Estimate Tajimas D and other statistics
• curprev 18:4718:47, 8 February 2017‎ Thorfinn talk contribs‎ 16,083 bytes +6‎ →‎Step 3a: Estimate Tajimas D and other statistics
• curprev 18:4518:45, 8 February 2017‎ Thorfinn talk contribs‎ 16,077 bytes −101‎ →‎Step 3a: Estimate Tajimas D and other statistics
• curprev 18:4518:45, 8 February 2017‎ Thorfinn talk contribs‎ 16,178 bytes −35‎ →‎Step 2: Calculate the thetas for each site
• curprev 18:4418:44, 8 February 2017‎ Thorfinn talk contribs‎ 16,213 bytes −86‎ →‎Step 2: Calculate the thetas for each site
• curprev 18:4118:41, 8 February 2017‎ Thorfinn talk contribs‎ 16,299 bytes +145‎ →‎Step 2: Calculate the thetas for each site
• curprev 18:3918:39, 8 February 2017‎ Thorfinn talk contribs‎ 16,154 bytes −57‎ →‎Full command list for below examples
• curprev 18:3918:39, 8 February 2017‎ Thorfinn talk contribs‎ 16,211 bytes +14‎ →‎Example
• curprev 18:3818:38, 8 February 2017‎ Thorfinn talk contribs‎ 16,197 bytes +13‎ No edit summary

26 August 2016

• curprev 09:5209:52, 26 August 2016‎ Thorfinn talk contribs‎ 16,184 bytes 0‎ No edit summary
• curprev 09:5109:51, 26 August 2016‎ Thorfinn talk contribs‎ 16,184 bytes 0‎ →‎Step 1: Finding a 'global estimate' of the SFS
• curprev 09:5009:50, 26 August 2016‎ Thorfinn talk contribs‎ 16,184 bytes 0‎ No edit summary

5 February 2016

• curprev 17:4217:42, 5 February 2016‎ Thorfinn talk contribs‎ 16,184 bytes −5‎ →‎Step 1: Finding a 'global estimate' of the SFS

19 October 2015

• curprev 18:5218:52, 19 October 2015‎ Thorfinn talk contribs‎ 16,189 bytes −79‎ →‎Unknown ancestral state (folded sfs)
• curprev 18:5218:52, 19 October 2015‎ Thorfinn talk contribs‎ 16,268 bytes +1‎ →‎Step 1: Finding a 'global estimate' of the SFS
• curprev 18:5118:51, 19 October 2015‎ Thorfinn talk contribs‎ 16,267 bytes +1‎ updatated the examples for latest version of realSFS, thanks kebi
• curprev 18:5018:50, 19 October 2015‎ Thorfinn talk contribs‎ 16,266 bytes +1‎ →‎Full command list for below examples

3 November 2014

• curprev 20:5120:51, 3 November 2014‎ Thorfinn talk contribs‎ 16,265 bytes +170‎ →‎Example Output

30 June 2014

• curprev 14:1514:15, 30 June 2014‎ Thorfinn talk contribs‎ 16,095 bytes +4‎ →‎Step 3a: Estimate Tajimas D and other statistics
• curprev 14:1514:15, 30 June 2014‎ Thorfinn talk contribs‎ 16,091 bytes +2‎ →‎Step 1: Finding a 'global estimate' of the SFS
• curprev 14:1514:15, 30 June 2014‎ Thorfinn talk contribs‎ 16,089 bytes +8‎ →‎Full command list for below examples
• curprev 14:0114:01, 30 June 2014‎ Thorfinn talk contribs‎ 16,081 bytes −2‎ →‎Step 2: Calculate the thetas for each site
• curprev 14:0014:00, 30 June 2014‎ Thorfinn talk contribs‎ 16,083 bytes −2‎ →‎Step 1: Finding a 'global estimate' of the SFS
• curprev 14:0014:00, 30 June 2014‎ Thorfinn talk contribs‎ 16,085 bytes +783‎ →‎Example
• curprev 13:5813:58, 30 June 2014‎ Thorfinn talk contribs‎ 15,302 bytes −567‎ →‎Full command list for above examples
• curprev 13:5813:58, 30 June 2014‎ Thorfinn talk contribs‎ 15,869 bytes +1‎ →‎=Step 3b: Sliding Window example
• curprev 13:5813:58, 30 June 2014‎ Thorfinn talk contribs‎ 15,868 bytes +10‎ →‎Sliding Window example
• curprev 13:5813:58, 30 June 2014‎ Thorfinn talk contribs‎ 15,858 bytes +1‎ →‎Step 3: Estimate Tajimas D and other statistics
• curprev 13:5713:57, 30 June 2014‎ Thorfinn talk contribs‎ 15,857 bytes +77‎ →‎Full command list for above examples
• curprev 13:5613:56, 30 June 2014‎ Thorfinn talk contribs‎ 15,780 bytes +433‎ →‎Full command list for above examples
• curprev 13:5413:54, 30 June 2014‎ Thorfinn talk contribs‎ 15,347 bytes +57‎ →‎Example Output
• curprev 13:5313:53, 30 June 2014‎ Thorfinn talk contribs‎ 15,290 bytes −6‎ →‎Output of the .thetas.gz file
• curprev 13:5313:53, 30 June 2014‎ Thorfinn talk contribs‎ 15,296 bytes +7‎ →‎Estimate Tajimas D and other statistics
• curprev 13:5213:52, 30 June 2014‎ Thorfinn talk contribs‎ 15,289 bytes −1‎ →‎Estimate Tajimas D and other statistics
• curprev 13:5213:52, 30 June 2014‎ Thorfinn talk contribs‎ 15,290 bytes +1‎ →‎Step2: Calculate the thetas for each site
• curprev 13:5213:52, 30 June 2014‎ Thorfinn talk contribs‎ 15,289 bytes −2‎ →‎Step 1: Finding a 'global estimate' of the SFS
• curprev 13:5113:51, 30 June 2014‎ Thorfinn talk contribs‎ 15,291 bytes +7‎ →‎Calculate the thetas for each site
• curprev 13:5113:51, 30 June 2014‎ Thorfinn talk contribs‎ 15,284 bytes +4,293‎ →‎Estimate Tajimas D and other statistics
• curprev 13:4813:48, 30 June 2014‎ Thorfinn talk contribs‎ 10,991 bytes +26‎ →‎Output of the .thetas.gz file
• curprev 13:4513:45, 30 June 2014‎ Thorfinn talk contribs‎ 10,965 bytes +2‎ →‎Output of the .thetas.gz file
• curprev 13:4413:44, 30 June 2014‎ Thorfinn talk contribs‎ 10,963 bytes +6‎ →‎Step 1: Finding a 'global estimate' of the SFS
• curprev 13:4313:43, 30 June 2014‎ Thorfinn talk contribs‎ 10,957 bytes +1‎ →‎Step 1: Finding a 'global estimate' of the SFS=
• curprev 13:4313:43, 30 June 2014‎ Thorfinn talk contribs‎ 10,956 bytes +4‎ →‎Example
• curprev 13:4313:43, 30 June 2014‎ Thorfinn talk contribs‎ 10,952 bytes +48‎ →‎Example
• curprev 13:4113:41, 30 June 2014‎ Thorfinn talk contribs‎ 10,904 bytes −3‎ →‎Output of the .thetas.gz file
• curprev 13:4013:40, 30 June 2014‎ Thorfinn talk contribs‎ 10,907 bytes −21‎ →‎Example
• curprev 13:4013:40, 30 June 2014‎ Thorfinn talk contribs‎ 10,928 bytes +103‎ →‎Example
• curprev 13:3813:38, 30 June 2014‎ Thorfinn talk contribs‎ 10,825 bytes +1,060‎ →‎Example
• curprev 13:3613:36, 30 June 2014‎ Thorfinn talk contribs‎ m 9,765 bytes 0‎ Thorfinn moved page Tajima to Thetas,Tajima,Neutrality tests
• curprev 13:3313:33, 30 June 2014‎ Thorfinn talk contribs‎ 9,765 bytes −2‎ →‎Sliding Window example
• curprev 13:2013:20, 30 June 2014‎ Thorfinn talk contribs‎ 9,767 bytes +5‎ →‎Unknown ancestral state (folded sfs)
• curprev 13:1913:19, 30 June 2014‎ Thorfinn talk contribs‎ 9,762 bytes −1‎ →‎Unknown ancestral state (folded sfs)
• curprev 13:1913:19, 30 June 2014‎ Thorfinn talk contribs‎ 9,763 bytes +516‎ →‎.thetas.gz.pestPG
• curprev 13:1513:15, 30 June 2014‎ Thorfinn talk contribs‎ 9,247 bytes +4‎ →‎Example
• curprev 12:0512:05, 30 June 2014‎ Thorfinn talk contribs‎ 9,243 bytes +91‎ →‎Example
• curprev 12:0312:03, 30 June 2014‎ Thorfinn talk contribs‎ 9,152 bytes +600‎ →‎Example
• curprev 12:0312:03, 30 June 2014‎ Thorfinn talk contribs‎ 8,552 bytes −1‎ →‎Example
• curprev 11:3811:38, 30 June 2014‎ Thorfinn talk contribs‎ 8,553 bytes −16‎ →‎Example
• curprev 11:3811:38, 30 June 2014‎ Thorfinn talk contribs‎ 8,569 bytes +103‎ →‎Example
• curprev 10:5910:59, 30 June 2014‎ Thorfinn talk contribs‎ 8,466 bytes 0‎ No edit summary

26 June 2014

• curprev 13:2213:22, 26 June 2014‎ Albrecht talk contribs‎ 8,466 bytes +14‎ →‎Example
• curprev 13:1813:18, 26 June 2014‎ Albrecht talk contribs‎ 8,452 bytes −65‎ →‎Example
• curprev 13:1613:16, 26 June 2014‎ Albrecht talk contribs‎ 8,517 bytes +203‎ →‎Example

19 June 2014

• curprev 10:1110:11, 19 June 2014‎ Thorfinn talk contribs‎ 8,314 bytes +2‎ →‎Sliding Window example
• curprev 10:1110:11, 19 June 2014‎ Thorfinn talk contribs‎ 8,312 bytes +15‎ →‎Sliding Window example

10 March 2014

• curprev 10:5510:55, 10 March 2014‎ Thorfinn talk contribs‎ 8,297 bytes +85‎ →‎Example

6 March 2014

• curprev 11:5311:53, 6 March 2014‎ Albrecht talk contribs‎ 8,212 bytes −9‎ →‎Example
• curprev 11:5211:52, 6 March 2014‎ Albrecht talk contribs‎ 8,221 bytes −9‎ →‎Unknown ancestral state (folded sfs)
• curprev 11:5211:52, 6 March 2014‎ Albrecht talk contribs‎ 8,230 bytes +4‎ →‎Unknown ancestral state (folded sfs)
• curprev 11:5111:51, 6 March 2014‎ Albrecht talk contribs‎ 8,226 bytes +4‎ →‎Unknown ancestral state (folded sfs)
• curprev 11:5011:50, 6 March 2014‎ Albrecht talk contribs‎ 8,222 bytes −4‎ →‎Example
• curprev 11:5011:50, 6 March 2014‎ Albrecht talk contribs‎ 8,226 bytes +16‎ →‎Unknown ancestral state (folded sfs)
• curprev 11:4611:46, 6 March 2014‎ Albrecht talk contribs‎ 8,210 bytes +26‎ →‎Unknown ancestral state (folded sfs)
• curprev 11:4411:44, 6 March 2014‎ Albrecht talk contribs‎ 8,184 bytes +170‎ →‎Unknown ancestral state (folded sfs)
• curprev 11:4011:40, 6 March 2014‎ Albrecht talk contribs‎ 8,014 bytes +33‎ →‎Sliding Window example
• curprev 11:3811:38, 6 March 2014‎ Albrecht talk contribs‎ 7,981 bytes +129‎ →‎.thetas.gz is
• curprev 11:3711:37, 6 March 2014‎ Albrecht talk contribs‎ 7,852 bytes +67‎ →‎Example
• curprev 11:3611:36, 6 March 2014‎ Albrecht talk contribs‎ 7,785 bytes −18‎ →‎Sliding Window example
• curprev 11:2711:27, 6 March 2014‎ Albrecht talk contribs‎ 7,803 bytes +1‎ →‎Example
• curprev 11:2511:25, 6 March 2014‎ Albrecht talk contribs‎ 7,802 bytes +72‎ →‎Example
• curprev 11:0911:09, 6 March 2014‎ Albrecht talk contribs‎ 7,730 bytes +39‎ →‎Example

26 February 2014

• curprev 13:1513:15, 26 February 2014‎ Albrecht talk contribs‎ 7,691 bytes +10‎ No edit summary

31 January 2014

• curprev 23:0823:08, 31 January 2014‎ Thorfinn talk contribs‎ 7,681 bytes +25‎ No edit summary

17 December 2013

• curprev 15:2515:25, 17 December 2013‎ Thorfinn talk contribs‎ 7,656 bytes +66‎ →‎Example