ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
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copy latest and make a new annotated tag and push to wiki | copy latest and make a new annotated tag and push to wiki | ||
<pre> | <pre> | ||
VERSION=0.916 | |||
mkdir delme | mkdir delme | ||
cd delme | cd delme | ||
git clone https://github.com/ANGSD/angsd | git clone https://github.com/ANGSD/angsd | ||
git clone https://github.com/SAMtools/htslib | git clone https://github.com/SAMtools/htslib | ||
cd angsd; git tag -a | cd angsd; git tag -a $VERSION -m "time for a new version" | ||
git push | git push | ||
#modify Makefile to newversion PACKAGE_VERSION = 0.914 for exapmle | #modify Makefile to newversion PACKAGE_VERSION = 0.914 for exapmle | ||
tar cvf | tar cvf angsd${VERSION}.tar.gz angsd htslib --exclude .git | ||
scp | scp angsd${VERSION}.tar.gz software@popgen.dk:/home/software/download/angsd/ | ||
</pre> | </pre> | ||
Revision as of 15:30, 23 January 2017
How to deploy
Make a combined angsd htslib to put on wiki download
copy latest and make a new annotated tag and push to wiki
VERSION=0.916
mkdir delme
cd delme
git clone https://github.com/ANGSD/angsd
git clone https://github.com/SAMtools/htslib
cd angsd; git tag -a $VERSION -m "time for a new version"
git push
#modify Makefile to newversion PACKAGE_VERSION = 0.914 for exapmle
tar cvf angsd${VERSION}.tar.gz angsd htslib --exclude .git
scp angsd${VERSION}.tar.gz software@popgen.dk:/home/software/download/angsd/
Make a new github version to put on github
#modify Makefile to newversion PACKAGE_VERSION = 0.915 for exapmle git commit Makefile -m "Preparing new 0.915 version" git push git push --tags