ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
User contributions for Thorfinn
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5 February 2015
- 22:2922:29, 5 February 2015 diff hist +98 Contamination No edit summary
19 December 2014
- 17:2817:28, 19 December 2014 diff hist 0 Installation →Unix
- 17:2817:28, 19 December 2014 diff hist 0 Installation No edit summary
- 17:2717:27, 19 December 2014 diff hist +60 Change log No edit summary
- 17:2717:27, 19 December 2014 diff hist 0 MediaWiki:Sitenotice No edit summary
- 10:4710:47, 19 December 2014 diff hist +141 Input →VCF files
- 10:4710:47, 19 December 2014 diff hist +237 Input →VCF files
- 10:4410:44, 19 December 2014 diff hist +467 Input →Genotype Probability Files
- 10:3810:38, 19 December 2014 diff hist +50 Input No edit summary
17 December 2014
- 20:5920:59, 17 December 2014 diff hist +182 SFS Estimation →Options
- 20:5020:50, 17 December 2014 diff hist +74 SFS Estimation →-doSaf 2
- 20:4520:45, 17 December 2014 diff hist +152 SFS Estimation →-doSaf 2
- 20:2320:23, 17 December 2014 diff hist +344 SFS Estimation →-doSaf 2
- 20:1420:14, 17 December 2014 diff hist +5 SFS Estimation →-doSaf 2
- 20:1220:12, 17 December 2014 diff hist −210 SFS Estimation →-doSaf 2
- 20:1020:10, 17 December 2014 diff hist +1,585 SFS Estimation →-doSaf 1
8 December 2014
- 16:0916:09, 8 December 2014 diff hist +14 SFS Estimation No edit summary
- 16:0816:08, 8 December 2014 diff hist 0 SFS Estimation No edit summary
- 16:0816:08, 8 December 2014 diff hist 0 SFS Estimation No edit summary
- 16:0816:08, 8 December 2014 diff hist +313 SFS Estimation No edit summary
- 10:2510:25, 8 December 2014 diff hist +685 SFS Estimation →Validation
- 10:2310:23, 8 December 2014 diff hist +13 SFS Estimation →Which genotype likelihood model should I choose ?
26 November 2014
- 09:5109:51, 26 November 2014 diff hist −174 Citing angsd No edit summary
- 09:5109:51, 26 November 2014 diff hist +911 Citing angsd No edit summary
- 09:4109:41, 26 November 2014 diff hist +56 MediaWiki:Sitenotice No edit summary
4 November 2014
- 19:3819:38, 4 November 2014 diff hist +16 Sites →Bedfiles?
- 19:3719:37, 4 November 2014 diff hist +290 Sites →Requirements
- 12:0412:04, 4 November 2014 diff hist −736 Sites →Requirements
- 12:0412:04, 4 November 2014 diff hist +82 Sites →Internal representation
- 12:0312:03, 4 November 2014 diff hist +131 Sites →Example of filter file for single sites
- 12:0212:02, 4 November 2014 diff hist −10 Sites →Example of filterfile
- 12:0212:02, 4 November 2014 diff hist +83 Sites →Details
- 11:5511:55, 4 November 2014 diff hist +45 Sites →Details
- 11:4811:48, 4 November 2014 diff hist +157 Sites →Brief overview
- 11:3911:39, 4 November 2014 diff hist +25 Sites No edit summary
- 11:3711:37, 4 November 2014 diff hist +21 Sites →Brief overview
- 11:2511:25, 4 November 2014 diff hist 0 MediaWiki:Sitenotice No edit summary
- 11:2311:23, 4 November 2014 diff hist 0 Installation No edit summary
- 11:2111:21, 4 November 2014 diff hist +61 Change log No edit summary
3 November 2014
2 November 2014
- 09:5909:59, 2 November 2014 diff hist +112 Fasta No edit summary
- 00:4100:41, 2 November 2014 diff hist +640 Sites No edit summary
- 00:3500:35, 2 November 2014 diff hist −5 Sites No edit summary
- 00:3500:35, 2 November 2014 diff hist +101 Sites No edit summary
31 October 2014
- 17:4917:49, 31 October 2014 diff hist −4 RealSFS →Brief overview
19 October 2014
- 23:2423:24, 19 October 2014 diff hist +17 Contamination No edit summary
1 October 2014
- 18:3118:31, 1 October 2014 diff hist −165 Genotype Likelihoods No edit summary
9 September 2014
- 19:0619:06, 9 September 2014 diff hist +36 2d SFS Estimation →Example
8 September 2014
- 22:2222:22, 8 September 2014 diff hist +12 2d SFS Estimation →Example
28 August 2014
- 15:3815:38, 28 August 2014 diff hist −210 Input →glf