ANGSD: Analysis of next generation Sequencing Data

Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.

Bugs: Difference between revisions

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     5. Posterior maf
     5. Posterior maf
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If use has selected multple mafs estimators.


4. write about single bam -i on wiki
4. write about single bam -i on wiki


If use has selected multple mafs estimators.


5. fix the maxsize of a chr now its 270e6
Best
Best


Thorfinn
Thorfinn

Revision as of 04:04, 18 October 2012

1. check numSites==0 in all generals: derived classes.

2. check if subdirs exists in outputfiles. Otherwise subtle crash.

3. Only print the

If you have selected more than one MAF estimator we will choose in following order
   1. knownminor bfgs
   2. knownminor EM
   3. unknownminor bfgs
   4. unknownminor EM
   5. Posterior maf

If use has selected multple mafs estimators.


4. write about single bam -i on wiki


5. fix the maxsize of a chr now its 270e6 Best

Thorfinn