ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
User contributions for Thorfinn
Jump to navigation
Jump to search
19 June 2012
- 12:3312:33, 19 June 2012 diff hist +444 SNP Calling No edit summary
- 12:2012:20, 19 June 2012 diff hist +94 Allele Frequencies →Estimator from sequencing data
- 12:1812:18, 19 June 2012 diff hist +73 Genotype calling No edit summary
- 12:1512:15, 19 June 2012 diff hist +107 N SNP Calling Created page with "angsd can estimate and LRT for the site being variable. This works in tandem with -doMAF and -doMajorMinor."
- 12:0112:01, 19 June 2012 diff hist −265 SFS Estimation →Full example for simulating nextgen data and estimating SFS (somewhat deprecated should use sfstools now)
- 11:3411:34, 19 June 2012 diff hist +31 SFS Estimation →realSFS
- 11:3311:33, 19 June 2012 diff hist −41 SFS Estimation →realSFS
- 11:3111:31, 19 June 2012 diff hist −2 Input →tglf
- 11:3011:30, 19 June 2012 diff hist −6 Input →tglf
- 11:3011:30, 19 June 2012 diff hist +258 Input →tglf
- 11:2711:27, 19 June 2012 diff hist +10 Input →genotype likelihood files
- 11:2611:26, 19 June 2012 diff hist +461 Input →genotype likelihood files
- 11:2011:20, 19 June 2012 diff hist 0 Input →optional arguments
- 11:1911:19, 19 June 2012 diff hist −38 Input →bam files
- 11:1711:17, 19 June 2012 diff hist +1 Input No edit summary
14 June 2012
- 13:3713:37, 14 June 2012 diff hist +7 N Major Minor Created page with "SuX CuX"
1 June 2012
- 09:1509:15, 1 June 2012 diff hist +126 ANGSD →Commands
- 09:1309:13, 1 June 2012 diff hist +22 ANGSD →Commands
- 09:1209:12, 1 June 2012 diff hist +293 ANGSD →Commands
- 09:0809:08, 1 June 2012 diff hist +20 ANGSD No edit summary