ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
User contributions for Thorfinn
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8 February 2017
- 17:4117:41, 8 February 2017 diff hist +145 Thetas,Tajima,Neutrality tests →Step 2: Calculate the thetas for each site
- 17:3917:39, 8 February 2017 diff hist −57 Thetas,Tajima,Neutrality tests →Full command list for below examples
- 17:3917:39, 8 February 2017 diff hist +14 Thetas,Tajima,Neutrality tests →Example
- 17:3817:38, 8 February 2017 diff hist +13 Thetas,Tajima,Neutrality tests No edit summary
24 January 2017
- 12:5112:51, 24 January 2017 diff hist +80 Heterozygosity No edit summary current
- 12:4812:48, 24 January 2017 diff hist +2 Heterozygosity No edit summary
- 12:3112:31, 24 January 2017 diff hist +4 Heterozygosity No edit summary
- 12:3012:30, 24 January 2017 diff hist −2 Heterozygosity No edit summary
- 12:3012:30, 24 January 2017 diff hist +4 Heterozygosity No edit summary
23 January 2017
- 14:3914:39, 23 January 2017 diff hist 0 Installation No edit summary
- 14:3914:39, 23 January 2017 diff hist 0 MediaWiki:Sitenotice No edit summary
- 14:3714:37, 23 January 2017 diff hist +60 Change log →Latests
- 14:3114:31, 23 January 2017 diff hist +2 Thorfinn No edit summary
- 14:3014:30, 23 January 2017 diff hist +70 Thorfinn No edit summary
- 14:3014:30, 23 January 2017 diff hist +27 Thorfinn →Make a combined angsd htslib to put on wiki download
17 January 2017
- 16:3316:33, 17 January 2017 diff hist +6 PCA MDS →Options
12 January 2017
- 12:5712:57, 12 January 2017 diff hist +212 Error estimation →Error estimation using an outgroup and an error free individual current
10 January 2017
- 16:5716:57, 10 January 2017 diff hist +195 Heterozygosity →Local estimate
- 16:3316:33, 10 January 2017 diff hist +173 Heterozygosity No edit summary
- 16:3216:32, 10 January 2017 diff hist +111 Heterozygosity →Global estimate
- 16:3116:31, 10 January 2017 diff hist +2 Heterozygosity →Global estimate
- 16:3116:31, 10 January 2017 diff hist +459 Heterozygosity →Global estimate
- 16:2816:28, 10 January 2017 diff hist +147 Heterozygosity →Global estimate
- 16:2616:26, 10 January 2017 diff hist +101 Heterozygosity →Global estimate
- 16:2416:24, 10 January 2017 diff hist +92 Heterozygosity →Global estimate
- 16:2316:23, 10 January 2017 diff hist +267 Heterozygosity No edit summary
- 16:2216:22, 10 January 2017 diff hist +147 Heterozygosity No edit summary
- 16:1916:19, 10 January 2017 diff hist +63 N Heterozygosity Created page with "The heterozygosity is the proportion of heterozygous genotypes."
15 December 2016
- 12:4412:44, 15 December 2016 diff hist −326 HWE test No edit summary
- 10:1810:18, 15 December 2016 diff hist +411 Genotype calling →Examples
- 10:1310:13, 15 December 2016 diff hist +33 Genotype calling No edit summary
- 09:1509:15, 15 December 2016 diff hist +239 Fst →realSFS fst print
- 09:0409:04, 15 December 2016 diff hist +112 Fst →realSFS fst print
- 09:0209:02, 15 December 2016 diff hist +22 Fst →realSFS fst print
24 November 2016
- 18:5318:53, 24 November 2016 diff hist +110 HWE test No edit summary
- 18:4518:45, 24 November 2016 diff hist +77 SnpFilters No edit summary
- 18:4318:43, 24 November 2016 diff hist +25 SnpFilters No edit summary
- 18:1318:13, 24 November 2016 diff hist −80 SnpFilters No edit summary
- 18:1318:13, 24 November 2016 diff hist −11 SnpFilters No edit summary
15 November 2016
- 16:5716:57, 15 November 2016 diff hist −53 Installation No edit summary
- 16:5616:56, 15 November 2016 diff hist +277 Installation No edit summary
- 16:5416:54, 15 November 2016 diff hist 0 MediaWiki:Sitenotice No edit summary
- 16:5316:53, 15 November 2016 diff hist +36 Change log No edit summary
- 16:5216:52, 15 November 2016 diff hist +208 Thorfinn No edit summary
- 16:5116:51, 15 November 2016 diff hist +60 Change log No edit summary
- 16:4516:45, 15 November 2016 diff hist +318 Thorfinn No edit summary
- 16:4216:42, 15 November 2016 diff hist +176 Thorfinn No edit summary
- 16:4016:40, 15 November 2016 diff hist −38 Thorfinn No edit summary
- 16:3816:38, 15 November 2016 diff hist −1 Installation No edit summary
- 16:3616:36, 15 November 2016 diff hist 0 Installation No edit summary