ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
User contributions for Albrecht
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6 March 2014
- 12:0312:03, 6 March 2014 diff hist +67 SFS Estimation No edit summary
- 11:5311:53, 6 March 2014 diff hist −9 Thetas,Tajima,Neutrality tests →Example
- 11:5211:52, 6 March 2014 diff hist −9 Thetas,Tajima,Neutrality tests →Unknown ancestral state (folded sfs)
- 11:5211:52, 6 March 2014 diff hist +4 Thetas,Tajima,Neutrality tests →Unknown ancestral state (folded sfs)
- 11:5111:51, 6 March 2014 diff hist +4 Thetas,Tajima,Neutrality tests →Unknown ancestral state (folded sfs)
- 11:5011:50, 6 March 2014 diff hist −4 Thetas,Tajima,Neutrality tests →Example
- 11:5011:50, 6 March 2014 diff hist +16 Thetas,Tajima,Neutrality tests →Unknown ancestral state (folded sfs)
- 11:4611:46, 6 March 2014 diff hist +26 Thetas,Tajima,Neutrality tests →Unknown ancestral state (folded sfs)
- 11:4411:44, 6 March 2014 diff hist +170 Thetas,Tajima,Neutrality tests →Unknown ancestral state (folded sfs)
- 11:4011:40, 6 March 2014 diff hist +33 Thetas,Tajima,Neutrality tests →Sliding Window example
- 11:3811:38, 6 March 2014 diff hist +129 Thetas,Tajima,Neutrality tests →.thetas.gz is
- 11:3711:37, 6 March 2014 diff hist +67 Thetas,Tajima,Neutrality tests →Example
- 11:3611:36, 6 March 2014 diff hist −18 Thetas,Tajima,Neutrality tests →Sliding Window example
- 11:2711:27, 6 March 2014 diff hist +1 Thetas,Tajima,Neutrality tests →Example
- 11:2511:25, 6 March 2014 diff hist +72 Thetas,Tajima,Neutrality tests →Example
- 11:0911:09, 6 March 2014 diff hist +39 Thetas,Tajima,Neutrality tests →Example
5 March 2014
- 20:1520:15, 5 March 2014 diff hist +1 Filters →Extra
- 20:1420:14, 5 March 2014 diff hist +16 Plink →Example
- 20:1220:12, 5 March 2014 diff hist −11 Filters →Extra
- 20:1220:12, 5 March 2014 diff hist −2 Plink →Example
- 20:0920:09, 5 March 2014 diff hist 0 Plink No edit summary
- 20:0820:08, 5 March 2014 diff hist 0 Plink →Example
- 20:0120:01, 5 March 2014 diff hist −5 Plink No edit summary
- 20:0020:00, 5 March 2014 diff hist +38 MediaWiki:Sidebar No edit summary
- 19:3819:38, 5 March 2014 diff hist +29 Association →Example with imputation (using BEAGLE)
- 19:3619:36, 5 March 2014 diff hist +556 Association →Example with imputation (using BEAGLE)
- 19:3519:35, 5 March 2014 diff hist +279 Input →Genotype Probability Files
- 19:1819:18, 5 March 2014 diff hist −998 Bugs No edit summary
- 19:1019:10, 5 March 2014 diff hist +418 Association →Example
- 19:0619:06, 5 March 2014 diff hist −39 MediaWiki:Sidebar No edit summary
- 19:0519:05, 5 March 2014 diff hist +405 Beagle input →output
- 18:5918:59, 5 March 2014 diff hist −29 Beagle input →Example
- 18:5818:58, 5 March 2014 diff hist +139 Beagle input No edit summary
- 18:5418:54, 5 March 2014 diff hist −45 SNP calling No edit summary
26 February 2014
- 20:0420:04, 26 February 2014 diff hist +11 SNP calling No edit summary
- 18:4318:43, 26 February 2014 diff hist −43 Allele Frequencies →.mafs
- 18:4318:43, 26 February 2014 diff hist −1 Allele Frequencies →.mafs
- 18:4318:43, 26 February 2014 diff hist +8 Allele Frequencies →.mafs
- 18:4018:40, 26 February 2014 diff hist +105 Allele Frequencies →.mafs
- 18:3718:37, 26 February 2014 diff hist −606 Allele Frequencies →.mafs
- 18:3618:36, 26 February 2014 diff hist +44 Allele Frequencies →Allele Frequency estimation
- 18:3618:36, 26 February 2014 diff hist +974 N SYKmaf Created page with "==ML estimator with known minor== First infer the Major and Minor allele and then use BFGS (-doMaf 1) optimazation or the EM algorithm (..."
- 18:3518:35, 26 February 2014 diff hist +41 Allele Frequencies →Allele Frequency estimation
- 18:3518:35, 26 February 2014 diff hist −985 Allele Frequencies →Theory
- 18:3418:34, 26 February 2014 diff hist +64 Allele Frequencies No edit summary
- 18:3218:32, 26 February 2014 diff hist +11 User:Thorfinn No edit summary
- 18:3218:32, 26 February 2014 diff hist +867 User:Thorfinn →Anders changes to version 583
- 18:1318:13, 26 February 2014 diff hist +330 User:Thorfinn No edit summary
- 17:4717:47, 26 February 2014 diff hist +57 Allele Frequencies →Example
- 17:4617:46, 26 February 2014 diff hist −19 Allele Frequencies No edit summary