ANGSD: Analysis of next generation Sequencing Data

Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.

Allele Frequencies

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Revision as of 22:02, 14 June 2012 by Albrecht (talk | contribs) (Created page with "==Allele Frequency estimation== -doMaf INT INT=1 bfgs known minor INT=2 EM known minor INT=4 BFGS unknown minor INT=8 EM unknown minor ===Phat estimator=== ===ML est...")

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Allele Frequency estimation

-doMaf INT

INT=1 bfgs known minor

INT=2 EM known minor

INT=4 BFGS unknown minor

INT=8 EM unknown minor


Phat estimator

ML estimator with known minor

ML estimator with unknown minor