User contributions for Thorfinn

16 July 2022

• 14:0414:04, 16 July 2022 diff hist 0‎ Installation ‎No edit summary
• 14:0414:04, 16 July 2022 diff hist +75‎ Thorfinn ‎No edit summary current
• 14:0314:03, 16 July 2022 diff hist 0‎ MediaWiki:Sitenotice ‎No edit summary current
• 14:0114:01, 16 July 2022 diff hist 0‎ Thorfinn ‎No edit summary
• 13:5913:59, 16 July 2022 diff hist +60‎ Change log ‎No edit summary current

26 June 2022

• 13:2013:20, 26 June 2022 diff hist −6‎ RealSFS ‎No edit summary current

23 May 2022

• 12:3212:32, 23 May 2022 diff hist −126‎ Vcf ‎No edit summary

23 March 2022

• 09:4109:41, 23 March 2022 diff hist +201‎ N DistAngsd ‎ Created page with "There are methods for inferring the genetic distance based on genotype likelihoods using proper models within molecular evolution. distAngsd has its very own website https://..." current

2 March 2022

• 23:2823:28, 2 March 2022 diff hist +1‎ Mismatch ‎No edit summary current
• 23:2723:27, 2 March 2022 diff hist +390‎ Mismatch ‎No edit summary
• 23:1423:14, 2 March 2022 diff hist +17‎ Genotype calling ‎ →‎Options current

8 February 2022

• 13:4713:47, 8 February 2022 diff hist 0‎ Installation ‎No edit summary
• 13:2413:24, 8 February 2022 diff hist +60‎ Change log ‎No edit summary
• 13:2313:23, 8 February 2022 diff hist 0‎ MediaWiki:Sitenotice ‎No edit summary
• 13:2313:23, 8 February 2022 diff hist 0‎ Thorfinn ‎No edit summary

18 August 2021

• 11:1011:10, 18 August 2021 diff hist −285‎ SFS Estimation ‎ →‎Brief Overview

26 July 2021

• 16:0116:01, 26 July 2021 diff hist +108‎ MsToGlf ‎No edit summary current

15 March 2021

• 11:4711:47, 15 March 2021 diff hist +60‎ Change log ‎No edit summary
• 11:4711:47, 15 March 2021 diff hist 0‎ MediaWiki:Sitenotice ‎No edit summary
• 11:4511:45, 15 March 2021 diff hist +12‎ Installation ‎No edit summary
• 11:3911:39, 15 March 2021 diff hist 0‎ Thorfinn ‎ →‎Make a new github version to put on github
• 11:3811:38, 15 March 2021 diff hist +12‎ Thorfinn ‎ →‎Make a combined angsd htslib to put on wiki download

27 October 2020

• 11:2111:21, 27 October 2020 diff hist −118‎ Haploid calling ‎ →‎Major bug in version 0.911 (not in <0.911) current

27 August 2020

• 14:4014:40, 27 August 2020 diff hist +80‎ Thetas,Tajima,Neutrality tests ‎ →‎Full command list for below examples current

2 May 2020

• 06:3406:34, 2 May 2020 diff hist 0‎ Allele Counts ‎ →‎Depth Distribution current

27 April 2020

• 18:3818:38, 27 April 2020 diff hist +60‎ Change log ‎ →‎Latests
• 17:3717:37, 27 April 2020 diff hist 0‎ Thorfinn ‎No edit summary

1 April 2020

• 13:0613:06, 1 April 2020 diff hist +109‎ Thetas,Tajima,Neutrality tests ‎ →‎Step 1: Finding a 'global estimate' of the SFS
• 13:0513:05, 1 April 2020 diff hist +169‎ Thetas,Tajima,Neutrality tests ‎ →‎Full command list for below examples
• 13:0313:03, 1 April 2020 diff hist +37‎ Thetas,Tajima,Neutrality tests ‎ →‎Full command list for below examples
• 12:5612:56, 1 April 2020 diff hist −493‎ Thetas,Tajima,Neutrality tests ‎ →‎Unknown ancestral state (folded sfs)
• 12:5212:52, 1 April 2020 diff hist −38‎ Thetas,Tajima,Neutrality tests ‎ →‎Step 2: Calculate the thetas for each site

15 November 2019

• 08:4908:49, 15 November 2019 diff hist −154‎ Filters ‎ →‎Number of non missing individuals current
• 08:4808:48, 15 November 2019 diff hist +3‎ Filters ‎ →‎Number of non missing individuals

25 October 2019

• 17:5217:52, 25 October 2019 diff hist +95‎ SFS Estimation ‎No edit summary

26 August 2019

• 12:1212:12, 26 August 2019 diff hist 0‎ Installation ‎No edit summary
• 12:1012:10, 26 August 2019 diff hist +60‎ Change log ‎No edit summary
• 12:0912:09, 26 August 2019 diff hist 0‎ MediaWiki:Sitenotice ‎No edit summary
• 12:0912:09, 26 August 2019 diff hist +16‎ Thorfinn ‎No edit summary

17 August 2019

• 03:3803:38, 17 August 2019 diff hist +595‎ Fst ‎ →‎Note about fst for folded spectra current
• 03:3103:31, 17 August 2019 diff hist +39‎ Fst ‎No edit summary
• 03:2603:26, 17 August 2019 diff hist +15‎ 2d SFS Estimation ‎No edit summary current
• 03:2503:25, 17 August 2019 diff hist +140‎ 2d SFS Estimation ‎No edit summary
• 03:2403:24, 17 August 2019 diff hist +36‎ 2d SFS Estimation ‎No edit summary
• 03:2303:23, 17 August 2019 diff hist +174‎ 2d SFS Estimation ‎No edit summary

30 April 2019

• 17:2617:26, 30 April 2019 diff hist +535‎ Plink ‎No edit summary current

22 February 2019

• 18:4018:40, 22 February 2019 diff hist −43‎ Installation ‎No edit summary
• 18:3918:39, 22 February 2019 diff hist +60‎ Change log ‎ →‎Latests
• 18:3818:38, 22 February 2019 diff hist 0‎ MediaWiki:Sitenotice ‎No edit summary
• 18:3718:37, 22 February 2019 diff hist 0‎ Thorfinn ‎ →‎Make a new github version to put on github
• 18:3618:36, 22 February 2019 diff hist 0‎ Thorfinn ‎ →‎Make a combined angsd htslib to put on wiki download
• 18:3018:30, 22 February 2019 diff hist 0‎ Thorfinn ‎ →‎Make a new github version to put on github
• 18:2918:29, 22 February 2019 diff hist 0‎ Thorfinn ‎ →‎Make a combined angsd htslib to put on wiki download
• 18:2818:28, 22 February 2019 diff hist −199‎ Input ‎ →‎Arguments
• 18:2718:27, 22 February 2019 diff hist 0‎ Input ‎ →‎Example
• 18:2518:25, 22 February 2019 diff hist −110‎ Input ‎ →‎VCF files
• 18:2418:24, 22 February 2019 diff hist −2‎ Input ‎ →‎VCF files
• 18:2318:23, 22 February 2019 diff hist +4,482‎ Input ‎ →‎Sequence data (BAM/CRAM/mpileup)
• 18:2318:23, 22 February 2019 diff hist −4,482‎ Input ‎ →‎VCF files
• 18:2318:23, 22 February 2019 diff hist −4,724‎ Input ‎ →‎VCF files

28 January 2019

• 18:1518:15, 28 January 2019 diff hist 0‎ Thorfinn ‎ →‎How to deploy
• 18:0818:08, 28 January 2019 diff hist +60‎ Change log ‎No edit summary
• 18:0818:08, 28 January 2019 diff hist 0‎ MediaWiki:Sitenotice ‎No edit summary
• 17:5617:56, 28 January 2019 diff hist +20‎ Thorfinn ‎ →‎Make a combined angsd htslib to put on wiki download

11 October 2018

• 12:1912:19, 11 October 2018 diff hist +59‎ Change log ‎ →‎Latests
• 12:1812:18, 11 October 2018 diff hist 0‎ MediaWiki:Sitenotice ‎No edit summary
• 12:1812:18, 11 October 2018 diff hist 0‎ Thorfinn ‎ →‎Make a new github version to put on github
• 12:1612:16, 11 October 2018 diff hist 0‎ Installation ‎No edit summary
• 12:1512:15, 11 October 2018 diff hist 0‎ Thorfinn ‎ →‎Make a combined angsd htslib to put on wiki download
• 11:3211:32, 11 October 2018 diff hist −43‎ Installation ‎No edit summary

28 September 2018

• 05:3505:35, 28 September 2018 diff hist −11‎ Installation ‎ →‎Install from github
• 05:1105:11, 28 September 2018 diff hist 0‎ Installation ‎ →‎Install from github
• 05:0205:02, 28 September 2018 diff hist +54‎ Installation ‎ →‎Install from github

20 April 2018

• 11:1011:10, 20 April 2018 diff hist +160‎ ThetaStat ‎No edit summary current

26 January 2018

• 00:1300:13, 26 January 2018 diff hist 0‎ User:Thorfinn ‎ →‎ms and psmc stuff current

25 January 2018

• 23:0723:07, 25 January 2018 diff hist +1‎ User:Thorfinn ‎ →‎ms and psmc stuff
• 23:0423:04, 25 January 2018 diff hist +3‎ User:Thorfinn ‎ →‎ms and psmc stuff
• 23:0223:02, 25 January 2018 diff hist 0‎ User:Thorfinn ‎ →‎ms and psmc stuff
• 22:5922:59, 25 January 2018 diff hist +4‎ User:Thorfinn ‎ →‎ms and psmc stuff
• 22:5622:56, 25 January 2018 diff hist +1‎ User:Thorfinn ‎ →‎ms and psmc stuff
• 22:5622:56, 25 January 2018 diff hist +2‎ User:Thorfinn ‎ →‎ms and psmc stuff
• 22:5622:56, 25 January 2018 diff hist +739‎ User:Thorfinn ‎ →‎ms stuff
• 21:2621:26, 25 January 2018 diff hist 0‎ User:Thorfinn ‎ →‎ms stuff
• 21:2621:26, 25 January 2018 diff hist +57‎ User:Thorfinn ‎ →‎ms stuff
• 21:2221:22, 25 January 2018 diff hist −1‎ User:Thorfinn ‎ →‎ms stuff
• 21:2121:21, 25 January 2018 diff hist +112‎ User:Thorfinn ‎No edit summary

9 January 2018

• 13:5413:54, 9 January 2018 diff hist 0‎ Installation ‎ →‎Unix
• 13:5413:54, 9 January 2018 diff hist 0‎ Installation ‎ →‎Download and Installation
• 13:5413:54, 9 January 2018 diff hist 0‎ Installation ‎No edit summary
• 13:5113:51, 9 January 2018 diff hist 0‎ Change log ‎No edit summary
• 13:5013:50, 9 January 2018 diff hist +60‎ Change log ‎ →‎Latests
• 13:4913:49, 9 January 2018 diff hist 0‎ MediaWiki:Sitenotice ‎No edit summary
• 13:4713:47, 9 January 2018 diff hist 0‎ Thorfinn ‎ →‎Make a new github version to put on github
• 13:4713:47, 9 January 2018 diff hist 0‎ Thorfinn ‎ →‎Make a new github version to put on github
• 13:4713:47, 9 January 2018 diff hist 0‎ Thorfinn ‎ →‎Make a new github version to put on github
• 13:3613:36, 9 January 2018 diff hist 0‎ Thorfinn ‎ →‎Make a combined angsd htslib to put on wiki download

6 November 2017

• 18:5318:53, 6 November 2017 diff hist +67‎ Beagle input ‎No edit summary current

2 November 2017

• 21:3921:39, 2 November 2017 diff hist +766‎ Input ‎ →‎-glf10_text
• 21:3521:35, 2 November 2017 diff hist +17‎ Input ‎ →‎VCF files
• 21:3521:35, 2 November 2017 diff hist −17‎ Input ‎ →‎-glf10_text