ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
User contributions for Thorfinn
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8 February 2017
- 18:4118:41, 8 February 2017 diff hist +145 Thetas,Tajima,Neutrality tests →Step 2: Calculate the thetas for each site
- 18:3918:39, 8 February 2017 diff hist −57 Thetas,Tajima,Neutrality tests →Full command list for below examples
- 18:3918:39, 8 February 2017 diff hist +14 Thetas,Tajima,Neutrality tests →Example
- 18:3818:38, 8 February 2017 diff hist +13 Thetas,Tajima,Neutrality tests No edit summary
24 January 2017
- 13:5113:51, 24 January 2017 diff hist +80 Heterozygosity No edit summary current
- 13:4813:48, 24 January 2017 diff hist +2 Heterozygosity No edit summary
- 13:3113:31, 24 January 2017 diff hist +4 Heterozygosity No edit summary
- 13:3013:30, 24 January 2017 diff hist −2 Heterozygosity No edit summary
- 13:3013:30, 24 January 2017 diff hist +4 Heterozygosity No edit summary
23 January 2017
- 15:3915:39, 23 January 2017 diff hist 0 Installation No edit summary
- 15:3915:39, 23 January 2017 diff hist 0 MediaWiki:Sitenotice No edit summary
- 15:3715:37, 23 January 2017 diff hist +60 Change log →Latests
- 15:3115:31, 23 January 2017 diff hist +2 Thorfinn No edit summary
- 15:3015:30, 23 January 2017 diff hist +70 Thorfinn No edit summary
- 15:3015:30, 23 January 2017 diff hist +27 Thorfinn →Make a combined angsd htslib to put on wiki download
17 January 2017
- 17:3317:33, 17 January 2017 diff hist +6 PCA MDS →Options
12 January 2017
- 13:5713:57, 12 January 2017 diff hist +212 Error estimation →Error estimation using an outgroup and an error free individual current
10 January 2017
- 17:5717:57, 10 January 2017 diff hist +195 Heterozygosity →Local estimate
- 17:3317:33, 10 January 2017 diff hist +173 Heterozygosity No edit summary
- 17:3217:32, 10 January 2017 diff hist +111 Heterozygosity →Global estimate
- 17:3117:31, 10 January 2017 diff hist +2 Heterozygosity →Global estimate
- 17:3117:31, 10 January 2017 diff hist +459 Heterozygosity →Global estimate
- 17:2817:28, 10 January 2017 diff hist +147 Heterozygosity →Global estimate
- 17:2617:26, 10 January 2017 diff hist +101 Heterozygosity →Global estimate
- 17:2417:24, 10 January 2017 diff hist +92 Heterozygosity →Global estimate
- 17:2317:23, 10 January 2017 diff hist +267 Heterozygosity No edit summary
- 17:2217:22, 10 January 2017 diff hist +147 Heterozygosity No edit summary
- 17:1917:19, 10 January 2017 diff hist +63 N Heterozygosity Created page with "The heterozygosity is the proportion of heterozygous genotypes."
15 December 2016
- 13:4413:44, 15 December 2016 diff hist −326 HWE test No edit summary
- 11:1811:18, 15 December 2016 diff hist +411 Genotype calling →Examples
- 11:1311:13, 15 December 2016 diff hist +33 Genotype calling No edit summary
- 10:1510:15, 15 December 2016 diff hist +239 Fst →realSFS fst print
- 10:0410:04, 15 December 2016 diff hist +112 Fst →realSFS fst print
- 10:0210:02, 15 December 2016 diff hist +22 Fst →realSFS fst print
24 November 2016
- 19:5319:53, 24 November 2016 diff hist +110 HWE test No edit summary
- 19:4519:45, 24 November 2016 diff hist +77 SnpFilters No edit summary
- 19:4319:43, 24 November 2016 diff hist +25 SnpFilters No edit summary
- 19:1319:13, 24 November 2016 diff hist −80 SnpFilters No edit summary
- 19:1319:13, 24 November 2016 diff hist −11 SnpFilters No edit summary
15 November 2016
- 17:5717:57, 15 November 2016 diff hist −53 Installation No edit summary
- 17:5617:56, 15 November 2016 diff hist +277 Installation No edit summary
- 17:5417:54, 15 November 2016 diff hist 0 MediaWiki:Sitenotice No edit summary
- 17:5317:53, 15 November 2016 diff hist +36 Change log No edit summary
- 17:5217:52, 15 November 2016 diff hist +208 Thorfinn No edit summary
- 17:5117:51, 15 November 2016 diff hist +60 Change log No edit summary
- 17:4517:45, 15 November 2016 diff hist +318 Thorfinn No edit summary
- 17:4217:42, 15 November 2016 diff hist +176 Thorfinn No edit summary
- 17:4017:40, 15 November 2016 diff hist −38 Thorfinn No edit summary
- 17:3817:38, 15 November 2016 diff hist −1 Installation No edit summary
- 17:3617:36, 15 November 2016 diff hist 0 Installation No edit summary