User contributions for Albrecht
Jump to navigation
Jump to search
24 September 2019
- 11:0711:07, 24 September 2019 diff hist +91 IBSrelate →run IBS, this will analyse each pair of individuals
- 11:0511:05, 24 September 2019 diff hist +15 IBSrelate →Specify an allele at each site
- 11:0411:04, 24 September 2019 diff hist +8 IBSrelate →Generate a saf (site allele frequency likelihood) file for each individual
- 11:0411:04, 24 September 2019 diff hist −23 IBSrelate →Generate a saf (site allele frequency likelihood) file for each individual
- 11:0411:04, 24 September 2019 diff hist −1 IBSrelate →Generate a saf (site allele frequency likelihood) file for each individual
- 11:0311:03, 24 September 2019 diff hist −8 IBSrelate →Generate a saf (site allele frequency likelihood) file for each individual
- 11:0311:03, 24 September 2019 diff hist −2 IBSrelate →Generate a saf (site allele frequency likelihood) file for each individual
- 11:0311:03, 24 September 2019 diff hist +1 IBSrelate →Generate a saf (site allele frequency likelihood) file for each individual
- 11:0311:03, 24 September 2019 diff hist +280 IBSrelate →Generate a saf (site allele frequency likelihood) file for each individual
- 10:5710:57, 24 September 2019 diff hist +66 IBSrelate No edit summary
- 10:5010:50, 24 September 2019 diff hist +222 IBSrelate →Generate a saf (site allele frequency likelihood) file for each individual
- 10:4710:47, 24 September 2019 diff hist +156 IBSrelate →make a genotype likelihood file (glf) containing all individuals
- 10:4510:45, 24 September 2019 diff hist +4 IBSrelate →IBS Method
- 10:4410:44, 24 September 2019 diff hist +4 IBSrelate →Setup
- 10:4110:41, 24 September 2019 diff hist +178 IBSrelate →Parse the results for a single pair of individuals
- 10:3710:37, 24 September 2019 diff hist +91 IBSrelate →Setup
- 10:3310:33, 24 September 2019 diff hist −11 IBSrelate →Setup
- 10:3310:33, 24 September 2019 diff hist +119 IBSrelate →Setup
- 10:3110:31, 24 September 2019 diff hist 0 IBSrelate →Get the example data
- 10:3010:30, 24 September 2019 diff hist +29 IBSrelate →Setup
- 10:3010:30, 24 September 2019 diff hist +69 IBSrelate →Setup
- 10:2810:28, 24 September 2019 diff hist −2 IBSrelate →Set up shell variables
- 10:2710:27, 24 September 2019 diff hist +22 IBSrelate →Application to the ANGSD example data
- 10:2710:27, 24 September 2019 diff hist −33 IBSrelate No edit summary
- 10:2610:26, 24 September 2019 diff hist −2 IBSrelate No edit summary
23 September 2019
- 15:1815:18, 23 September 2019 diff hist −4 IBSrelate No edit summary
- 15:1815:18, 23 September 2019 diff hist −2,932 IBSrelate No edit summary
- 15:1615:16, 23 September 2019 diff hist +11 IBSrelate →Examine the results
- 15:1515:15, 23 September 2019 diff hist +13 IBSrelate →run IBS, this will analyse each pair of individuals
- 15:1515:15, 23 September 2019 diff hist +13 IBSrelate →make a genotype likelihood file (glf) containing all individuals
- 15:1415:14, 23 September 2019 diff hist +38 IBSrelate No edit summary
- 15:1015:10, 23 September 2019 diff hist +109 IBSrelate →Parse the results for a single pair of individuals
- 15:0815:08, 23 September 2019 diff hist +43 IBSrelate →run realSFS on each pair of indiviudals
- 15:0715:07, 23 September 2019 diff hist +1 IBSrelate →Parse the results for a single pair of individuals
- 15:0715:07, 23 September 2019 diff hist +71 IBSrelate →run realSFS on each pair of indiviudals
- 15:0515:05, 23 September 2019 diff hist +3,173 IBSrelate No edit summary
- 10:4710:47, 23 September 2019 diff hist −1 IBSrelate →Demonstration of the IBS and realSFS methods on the angsd example data
- 10:4710:47, 23 September 2019 diff hist +1 IBSrelate →Calculating statistics from the output of IBS and realSFS
- 10:4610:46, 23 September 2019 diff hist +2 m IBSrelate →Calculating statistics from the output of IBS and realSFS
- 10:4310:43, 23 September 2019 diff hist +21 m IBSrelate No edit summary
- 10:3910:39, 23 September 2019 diff hist +20 m IBSrelate No edit summary
23 August 2019
- 13:0513:05, 23 August 2019 diff hist 0 PCAngsd No edit summary
8 August 2019
- 09:0009:00, 8 August 2019 diff hist −73 PCAngsdv2 →Quick start
18 July 2019
- 15:4415:44, 18 July 2019 diff hist +146 EvalAdmix →Quick start
- 15:4315:43, 18 July 2019 diff hist −616 EvalAdmix →Output Files
- 15:4315:43, 18 July 2019 diff hist +80 EvalAdmix →Run command example
- 15:3915:39, 18 July 2019 diff hist +147 EvalAdmix →Run command example
- 15:3815:38, 18 July 2019 diff hist −43 NgsAdmixTutorial →Download
- 15:3515:35, 18 July 2019 diff hist +667 EvalAdmix →Run command example
- 15:2715:27, 18 July 2019 diff hist +113 EvalAdmix →Run command example
- 15:2515:25, 18 July 2019 diff hist +51 EvalAdmix →Input File
- 15:2515:25, 18 July 2019 diff hist −2 EvalAdmix →Parameters
- 15:2415:24, 18 July 2019 diff hist −861 EvalAdmix →Parameters
- 15:2315:23, 18 July 2019 diff hist +5,089 N EvalAdmix Created page with "evalAdmix allows to evaluate the results of an admixture analysis. It takes as input the genotype data (either called genotypes in plink files or genotype likelihoods beagle f..."
- 15:1915:19, 18 July 2019 diff hist −35 MediaWiki:Sidebar No edit summary current
- 15:1915:19, 18 July 2019 diff hist +212 MediaWiki:Sidebar No edit summary
12 July 2019
- 11:4011:40, 12 July 2019 diff hist +19 MediaWiki:Sidebar No edit summary
- 11:3511:35, 12 July 2019 diff hist +13 NgsAdmixTutorial →Example of NGSadmix - Simple
- 11:3311:33, 12 July 2019 diff hist −2 NgsAdmixTutorial No edit summary
- 11:3111:31, 12 July 2019 diff hist +24 NgsAdmixTutorial →Create the the beagle genotype likelihood input file using ANGSD
- 11:3011:30, 12 July 2019 diff hist +1 NgsAdmixTutorial →Create the the beagle genotype likelihood input file using ANGSD
- 11:3011:30, 12 July 2019 diff hist −1 NgsAdmixTutorial →Create the the beagle genotype likelihood input file using ANGSD
- 11:3011:30, 12 July 2019 diff hist −1 NgsAdmixTutorial →Create the the beagle genotype likelihood input file using ANGSD
- 11:3011:30, 12 July 2019 diff hist +7 NgsAdmixTutorial →Create the the beagle genotype likelihood input file using ANGSD
- 11:2911:29, 12 July 2019 diff hist +127 NgsAdmixTutorial →Example of NGSadmix - Simple
- 11:2311:23, 12 July 2019 diff hist +27 NgsAdmixTutorial →Example of NGSadmix with admixed populations
- 11:1111:11, 12 July 2019 diff hist +1,037 NgsAdmixTutorial →Example of NGSadmix - Simple
- 10:4010:40, 12 July 2019 diff hist −11 NgsAdmixTutorial →Example of NGSadmix with admixed populations
- 10:3910:39, 12 July 2019 diff hist +1 NgsAdmixTutorial →Example of NGSadmix with admixed populations
- 10:3810:38, 12 July 2019 diff hist +2 NgsAdmixTutorial →Example of NGSadmix with admixed populations
- 10:3610:36, 12 July 2019 diff hist +63 NgsAdmixTutorial No edit summary
- 10:3110:31, 12 July 2019 diff hist −107 NgsAdmixTutorial No edit summary
- 10:3010:30, 12 July 2019 diff hist +96 NgsAdmixTutorial No edit summary
- 10:2610:26, 12 July 2019 diff hist +65 NgsAdmixTutorial No edit summary
- 10:2410:24, 12 July 2019 diff hist +1 NgsAdmixTutorial No edit summary
- 10:2210:22, 12 July 2019 diff hist 0 NgsAdmixTutorial No edit summary
- 10:2210:22, 12 July 2019 diff hist +1 NgsAdmixTutorial No edit summary
- 10:2110:21, 12 July 2019 diff hist −1 NgsAdmixTutorial No edit summary
- 10:2110:21, 12 July 2019 diff hist +14 NgsAdmixTutorial →Example of NGSadmix - Simple
- 10:2010:20, 12 July 2019 diff hist +64 NgsAdmixTutorial →Example of NGSadmix - Simple
- 10:1810:18, 12 July 2019 diff hist −304 NgsAdmixTutorial No edit summary
- 10:0210:02, 12 July 2019 diff hist −4 NgsAdmixTutorial No edit summary
- 09:5709:57, 12 July 2019 diff hist −126 NgsAdmix No edit summary
- 09:5309:53, 12 July 2019 diff hist +13 NgsAdmix →Installation
- 09:5209:52, 12 July 2019 diff hist −153 NgsAdmix No edit summary
- 09:5009:50, 12 July 2019 diff hist −29,350 NgsAdmix No edit summary
- 09:4909:49, 12 July 2019 diff hist +503 NgsAdmixv2 →Input File
- 09:3609:36, 12 July 2019 diff hist +12 NgsAdmixv2 →Parameters
- 09:3509:35, 12 July 2019 diff hist −107 NgsAdmixv2 →Parameters
- 09:3509:35, 12 July 2019 diff hist +177 NgsAdmixv2 →Quick start
- 09:3209:32, 12 July 2019 diff hist +75 NgsAdmixv2 No edit summary
- 09:3009:30, 12 July 2019 diff hist −82 NgsAdmixv2 →NGSadmix Independent Installation
8 July 2019
- 15:3915:39, 8 July 2019 diff hist −532 PCAngsd →Download
21 May 2019
- 16:3416:34, 21 May 2019 diff hist +249 IBSrelate →Example Usage
20 May 2019
- 17:2017:20, 20 May 2019 diff hist −15 IBSrelate No edit summary
- 15:5715:57, 20 May 2019 diff hist 0 IBSrelate →Example Usage
- 15:5715:57, 20 May 2019 diff hist +1 IBSrelate →run IBS
- 15:5615:56, 20 May 2019 diff hist 0 IBSrelate →IBS method
- 15:5315:53, 20 May 2019 diff hist −1 IBSrelate →Example Usage
- 15:5215:52, 20 May 2019 diff hist +6 IBSrelate →run realSFS for each pair of individuals