ANGSD: Analysis of next generation Sequencing Data
Latest tar.gz version is (0.938/0.939 on github), see Change_log for changes, and download it here.
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Showing below up to 73 results in range #21 to #93.
- (hist) SnpFilters [5,331 bytes]
- (hist) RealSFS [5,251 bytes]
- (hist) Genotype likelihoods from alignments new [5,114 bytes]
- (hist) Filters [5,114 bytes]
- (hist) MsToGlf [5,033 bytes]
- (hist) Relatedness [4,791 bytes]
- (hist) Genotype calling [4,543 bytes]
- (hist) Sites [3,890 bytes]
- (hist) Inbreed [3,624 bytes]
- (hist) Plink [3,600 bytes]
- (hist) Glcomparison [3,393 bytes]
- (hist) HWE test [3,350 bytes]
- (hist) Depth [2,903 bytes]
- (hist) Major Minor [2,637 bytes]
- (hist) Beagle input [2,524 bytes]
- (hist) Haploid calling [2,512 bytes]
- (hist) SNP calling [2,350 bytes]
- (hist) Korneliussen2013 [2,280 bytes]
- (hist) ANGSD [2,274 bytes]
- (hist) ErrorPerfect [2,063 bytes]
- (hist) RealSFSmethod [2,062 bytes]
- (hist) Citing angsd [1,940 bytes]
- (hist) PCA [1,876 bytes]
- (hist) Heterozygosity [1,845 bytes]
- (hist) Angsd structure [1,737 bytes]
- (hist) 2d SFS Estimation [1,726 bytes]
- (hist) Misc example [1,599 bytes]
- (hist) Installation [1,532 bytes]
- (hist) ThetaStat [1,503 bytes]
- (hist) Error estimation method [1,469 bytes]
- (hist) MajorMinor Method [1,283 bytes]
- (hist) Majorminor [1,183 bytes]
- (hist) Thorfinn [1,101 bytes]
- (hist) Mismatch [1,096 bytes]
- (hist) Orlando2013 [1,021 bytes]
- (hist) Rasmussen2011 [1,005 bytes]
- (hist) SYKmaf [974 bytes]
- (hist) ErrorSykMethod [841 bytes]
- (hist) Supersim [837 bytes]
- (hist) Gatk [809 bytes]
- (hist) Kim2011 [799 bytes]
- (hist) Base quality [757 bytes]
- (hist) Introduction [743 bytes]
- (hist) Authors [701 bytes]
- (hist) Fst PCA [685 bytes]
- (hist) SNP Calling [658 bytes]
- (hist) Regionfile [647 bytes]
- (hist) Nielsen2012 [611 bytes]
- (hist) NGSadmix [610 bytes]
- (hist) Li2011 [593 bytes]
- (hist) Temp [587 bytes]
- (hist) Skotte2012 [551 bytes]
- (hist) HWE and Inbreeding estimates [528 bytes]
- (hist) Changes [517 bytes]
- (hist) Memory Usage [445 bytes]
- (hist) PostFreq [395 bytes]
- (hist) Example of a quantitative phenotype file [364 bytes]
- (hist) Glf files [328 bytes]
- (hist) Direct Ancestry [317 bytes]
- (hist) Example of a covariate file [271 bytes]
- (hist) Example of a covariance file [271 bytes]
- (hist) Li2010 [256 bytes]
- (hist) DistAngsd [201 bytes]
- (hist) SoapSNP [175 bytes]
- (hist) Bugs [168 bytes]
- (hist) Pbs [107 bytes]
- (hist) LD [105 bytes]
- (hist) Example of cases control phenotype file [98 bytes]
- (hist) Tutorial [88 bytes]
- (hist) NgsRelate [84 bytes]
- (hist) Covariance matrix for PCA [29 bytes]
- (hist) Test [23 bytes]
- (hist) Skotte [0 bytes]